Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTCAACACCAGCTGCC
..(((((((..((((.(((..&)))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174938
GeneSymbolFRMD3
Binding site1032,1049
Score0.846
Seed1
Au0.529
Energy-20.6
Binding len17
Me-9.257
Phylopstem4.851603571428571
Phylopflank3.3796258925
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure