Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTGGTAGCTGCAAA
((((((((((.(..((.....&))..).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174959
GeneSymbolSVOPL
Binding site832,849
Score0.923
Seed1
Au0.5
Energy-18.4
Binding len17
Me-8.908
Phylopstem-0.0684362
Phylopflank1.778091950625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure