Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGGGCCTGTGTGGCTATGACCGTGATGGCTGCC
..(((((((((((((((((((&.)))).......)))))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174975
GeneSymbolSEC14L3
Binding site310,348
Score0.846
Seed1
Au0.397
Energy-21.9
Binding len31
Me-4.957
Phylopstem2.3531710862068964
Phylopflank1.685797115375
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure