Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGCCACCAGGTGCGGAAGGGGGTGGCAGTGA
(((((((((((((((((((...&))))............))))))))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_174976
GeneSymbolZDHHC22
Binding site845,879
Score0.846
Seed1
Au0.309
Energy-23.1
Binding len34
Me-3.938
Phylopstem0.16444555757575757
Phylopflank0.050915642500000004
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure