Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGGTGTGGCCAGGC
.((((((.((((.(((......&)))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_174981
GeneSymbolPOTED
Binding site5513,5529
Score0.923
Seed1
Au0.353
Energy-17.0
Binding len16
Me-7.396
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure