Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCAACAAGCTGCAGTTGACAC
.(((((((((((((((.((((&))))...)))).))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_174981
GeneSymbolPOTED
Binding site3710,3735
Score0.923
Seed1
Au0.529
Energy-21.1
Binding len25
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end7
Position3UTR
2D Structure