Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGAGATGGAGAATACGTTGTGGAGGTTCGCGCGCACAGTGA
((((((((((((((((((....&)))))))).))).......................)).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175038
GeneSymbolCNTN1
Binding site2941,2985
Score1.0
Seed1
Au0.471
Energy-21.8
Binding len44
Me-3.938
Phylopstem4.195126732558141
Phylopflank3.4613181849999997
Longest consecutive pairings8
Position of longest consecutive pairings36
Pairings in 3prime end4
PositionCDS
2D Structure