Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTGGGTAGAGGAGAGCCCAGTA
.((((((((((((((.(((...&))).)).)))))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175038
GeneSymbolCNTN1
Binding site2100,2123
Score0.885
Seed1
Au0.559
Energy-20.4
Binding len23
Me-4.026
Phylopstem4.58578658888889
Phylopflank3.9882965875000003
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure