Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCCCCAAACTACCCTCTTCCTGGGAAAGTAATTGCTGAGCCAGTA
.((((((((((((((((((((.&.))))))........))))))........)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349514
GeneSymbolPXK
Binding site1868,1917
Score0.923
Seed1
Au0.559
Energy-25.6
Binding len38
Me-3.793
Phylopstem0.06749671944444442
Phylopflank0.42607556750000014
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure