Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGCCTAGTAGCAGT
((((.((((.(((((((((((&))))))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175038
GeneSymbolCNTN1
Binding site2421,2442
Score0.923
Seed0
Au0.529
Energy-23.8
Binding len21
Me-9.299
Phylopstem4.756251181818182
Phylopflank3.6744371175
Longest consecutive pairings15
Position of longest consecutive pairings6
Pairings in 3prime end8
PositionCDS
2D Structure