Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGGAGCCGTGGTTCAGA
(((.((((((((((.((((..&)))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175038
GeneSymbolCNTN1
Binding site1910,1929
Score0.923
Seed0
Au0.574
Energy-19.7
Binding len19
Me-7.705
Phylopstem5.2887187
Phylopflank3.5364587765
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure