Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCCGCAGCTGTG
..(((((((((((.....(((&)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175040
GeneSymbolST6GALNAC4
Binding site416,433
Score0.923
Seed1
Au0.309
Energy-23.4
Binding len17
Me-6.782
Phylopstem0.34771114090909094
Phylopflank-0.23404252000000003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure