Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCAACCACTGCCCTACCAAACCTGTGGGTTGCAAA
(((((((((.((((((((((.&)))))))))).)..................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175061
GeneSymbolJAZF1
Binding site1917,1956
Score1.0
Seed1
Au0.574
Energy-20.9
Binding len39
Me-5.18
Phylopstem1.562774943
Phylopflank0.8640526214999998
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end7
Position3UTR
2D Structure