Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACTCCCCCCGTGACCCCACCCATCACCCCCTCCTCTTCATTCCGCAGCAGCAC
.(((.(((((((.((.((((.&.))))))..))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175061
GeneSymbolJAZF1
Binding site537,595
Score0.821
Seed0
Au0.368
Energy-20.7
Binding len21
Me-9.435
Phylopstem0.4949591428571428
Phylopflank0.07858901
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure