Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTGCATGCCAGC
..((((((.....(((((((((&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_175062
GeneSymbolRASGEF1C
Binding site983,999
Score0.815
Seed1
Au0.426
Energy-17.2
Binding len16
Me-14.717
Phylopstem2.667740777777778
Phylopflank1.9249971025
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure