Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCGCACCGTCCAGAGGCTGCAGG
(((((((((((((((......&))))))))..........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175078
GeneSymbolKRT77
Binding site1244,1270
Score0.846
Seed1
Au0.456
Energy-21.5
Binding len26
Me-4.171
Phylopstem3.8373263840000003
Phylopflank3.32218963
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end2
PositionCDS
2D Structure