Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCTGGGAGCCAGTA
.((((((((((....((((((.&)))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175566
GeneSymbolCNTN5
Binding site2222,2239
Score1.0
Seed1
Au0.515
Energy-24.4
Binding len17
Me-10.022
Phylopstem7.993225
Phylopflank5.099522448
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure