Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTTCAGCTGAAGGAGAACCCAGTGC
((((((((((((((((((((((&)))))))))..)))))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175566
GeneSymbolCNTN5
Binding site2450,2478
Score0.923
Seed1
Au0.485
Energy-23.6
Binding len28
Me-3.938
Phylopstem5.250985592592592
Phylopflank4.604424128749999
Longest consecutive pairings9
Position of longest consecutive pairings19
Pairings in 3prime end8
PositionCDS
2D Structure