Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGGCCACGGCCGCCTGCAGG
((((((..((((((((..(((&.))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175569
GeneSymbolXG
Binding site534,558
Score0.846
Seed0
Au0.279
Energy-21.8
Binding len19
Me-7.795
Phylopstem-0.095742675
Phylopflank0.07322917375000007
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure