Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCTCACATCCTGTGCCCTGGGGGACCAGCAGCTGCT
..((((((((((((.(.(((.&.)))..).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175571
GeneSymbolGIMAP8
Binding site496,537
Score0.872
Seed1
Au0.368
Energy-25.6
Binding len22
Me-5.692
Phylopstem-0.06802653076923072
Phylopflank-0.09590786375000007
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure