Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATTCAGGATGGAGTTACTAGACCCATGACAGCAGTGA
((((((((((.((((((((((.&)))))))))).))))).................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175605
GeneSymbolIFT88
Binding site591,630
Score0.923
Seed1
Au0.529
Energy-23.9
Binding len39
Me-6.762
Phylopstem5.5995679
Phylopflank4.749883012500001
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end7
PositionCDS
2D Structure