Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGTGAAAAGTGCAGCTGCAAC
(((((((((((.((.......&.)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175605
GeneSymbolIFT88
Binding site1675,1696
Score1.0
Seed1
Au0.574
Energy-21.1
Binding len16
Me-8.253
Phylopstem3.623763181818182
Phylopflank4.3503000274999994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure