Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATGAAAGTAGCAGTAAC
((((.(((((..(((((((((&)))))))))..))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175605
GeneSymbolIFT88
Binding site2656,2678
Score0.923
Seed0
Au0.588
Energy-19.6
Binding len22
Me-14.228
Phylopstem-0.31157197777777784
Phylopflank-0.21534175250000007
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure