Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGATGATTCCACACTGCAT
.(((((.((.(((((((((((&)))))))))......)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175607
GeneSymbolCNTN4
Binding site385,411
Score0.923
Seed0
Au0.574
Energy-19.7
Binding len26
Me-6.58
Phylopstem3.511901
Phylopflank3.251307334999999
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure