Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCGGAGGGAGGTGCCGGTC
.((((((.(((((((((((...&)))))))..)))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175610
GeneSymbolTJP1
Binding site199,220
Score0.846
Seed1
Au0.191
Energy-23.6
Binding len21
Me-6.107
Phylopstem5.8570026923076925
Phylopflank4.855735090000001
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position5UTR
2D Structure