Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTGATCATTCCAGGCACTCGCCGCAGCAGCC
..((.((((((((((((((((&))))).............)))...)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175610
GeneSymbolTJP1
Binding site1402,1438
Score0.808
Seed0
Au0.426
Energy-20.9
Binding len36
Me-9.076
Phylopstem-0.3025432718750001
Phylopflank-0.35645961375
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure