Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCGGAGAAGTGCAGCTGCT
..(((((((((.((.(..(((&)))..).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175617
GeneSymbolMT1E
Binding site229,249
Score0.923
Seed1
Au0.397
Energy-21.7
Binding len20
Me-9.039
Phylopstem1.8119052222222223
Phylopflank2.4594604775
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure