Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTCCAACTGCCTGACTGCT
..(((((.(((((((.(((((&))))).)))))))..).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175617
GeneSymbolMT1E
Binding site5,27
Score0.846
Seed0
Au0.482
Energy-19.3
Binding len22
Me-7.504
Phylopstem-0.9877865714285715
Phylopflank-1.39417329875
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end7
Position5UTR
2D Structure