Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAAGCGCGAGCTTACTGGCTCCAGAAGTGA
(((((((((((((((((((...&))))))))))...))))).............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175623
GeneSymbolRAB3IP
Binding site385,421
Score1.0
Seed1
Au0.412
Energy-23.3
Binding len36
Me-3.938
Phylopstem2.4765257142857138
Phylopflank1.1328210619999999
Longest consecutive pairings10
Position of longest consecutive pairings26
Pairings in 3prime end5
Position5UTR
2D Structure