Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAACCGCAGCAGCT
..((.((((((((((......&)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175624
GeneSymbolRAB3IP
Binding site7214,7228
Score0.846
Seed0
Au0.485
Energy-20.5
Binding len14
Me-9.309
Phylopstem-0.52063749
Phylopflank-0.26097880875
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end2
Position3UTR
2D Structure