Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCGAGCTGTAAA
((((((((.((((((......&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175630
GeneSymbolDNMT3A
Binding site1498,1513
Score1.0
Seed1
Au0.574
Energy-20.4
Binding len15
Me-5.227
Phylopstem0.77477225
Phylopflank1.05822181375
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure