Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGTTTTCTGCAGCTC
....((((((((...((((((&)))))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175630
GeneSymbolDNMT3A
Binding site1165,1185
Score0.846
Seed0
Au0.426
Energy-19.6
Binding len20
Me-12.428
Phylopstem2.453363
Phylopflank1.9779138362500004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure