Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTGTAGATTGACAGCTTTAACACTGCTGAATGCCAGGTT
(((((((((.((..((((....&.)))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_175634
GeneSymbolRUNX1T1
Binding site4178,4219
Score1.0
Seed1
Au0.618
Energy-19.4
Binding len18
Me-7.326
Phylopstem0.06021295777777777
Phylopflank0.11901754325
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure