Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTCAGAGAGGTTCGTGCCAA
...((((.((((((((((((((&)))))))))))))).....)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175634
GeneSymbolRUNX1T1
Binding site6542,6566
Score0.923
Seed0
Au0.5
Energy-25.8
Binding len24
Me-8.828
Phylopstem0.24368667142857145
Phylopflank0.16397443287499996
Longest consecutive pairings14
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure