Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCCTTTTGTTGTGTGGGGTG
((((.((((((((.((((((((&))))))))...)))).)))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_175635
GeneSymbolRUNX1T1
Binding site105,131
Score0.846
Seed0
Au0.471
Energy-20.2
Binding len26
Me-8.913
Phylopstem0.5650822000000001
Phylopflank0.6541158956249998
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
Position5UTR
2D Structure