Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTGTAGATTGACAGCTTTAACACTGCTGAATGCCAGGTT
(((((((((.((..((((....&.)))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_175635
GeneSymbolRUNX1T1
Binding site3679,3720
Score1.0
Seed1
Au0.618
Energy-19.4
Binding len18
Me-7.326
Phylopstem2.319216222222222
Phylopflank2.87923435
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure