Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTACCCTGCAGCAGTTTGGCAAT
(((((((((((((.((((((.&)))))).))).....))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175635
GeneSymbolRUNX1T1
Binding site501,529
Score0.846
Seed1
Au0.544
Energy-20.5
Binding len28
Me-4.794
Phylopstem-0.74273524
Phylopflank-0.14620470500000002
Longest consecutive pairings6
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure