Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGACCCAGTTGCAC
.((((((((.((((....(((&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175635
GeneSymbolRUNX1T1
Binding site1373,1391
Score0.923
Seed1
Au0.412
Energy-19.4
Binding len18
Me-6.004
Phylopstem-0.09062229625
Phylopflank-0.19617413237499992
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure