Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTGTAGATTGACAGCTTTAACACTGCTGAATGCCAGGTT
(((((((((.((..((((....&.)))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_175636
GeneSymbolRUNX1T1
Binding site3793,3834
Score0.923
Seed1
Au0.618
Energy-19.4
Binding len18
Me-7.326
Phylopstem3.7133599999999998
Phylopflank4.5100097537499995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure