Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTACCCTGCAGCAGTTTGGCAAT
(((((((((((((.((((((.&)))))).))).....))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175636
GeneSymbolRUNX1T1
Binding site615,643
Score0.923
Seed1
Au0.544
Energy-20.5
Binding len28
Me-4.794
Phylopstem-0.01463153999999999
Phylopflank-0.12938687187500011
Longest consecutive pairings6
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure