Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTATGAGGTCACCTACGGCTGTGGCCGTGCAGG
((((((((((((((((.((((&.)))))))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175709
GeneSymbolCBX7
Binding site3417,3454
Score0.846
Seed1
Au0.368
Energy-23.8
Binding len24
Me-3.938
Phylopstem6.10897311111111
Phylopflank4.2901003625
Longest consecutive pairings15
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure