Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTTCGGGGGAGGGGCTG
....(((((((((((((((((.&))))))...))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175719
GeneSymbolTPO
Binding site840,861
Score0.987
Seed0
Au0.426
Energy-24.0
Binding len21
Me-9.547
Phylopstem0.44432944
Phylopflank0.6433638424999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure