Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCAAGACCAGCCAAACTGCAGGTGCAGG
(((((.((((((((((((((.&)))))))...........))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175722
GeneSymbolTPO
Binding site1107,1139
Score0.846
Seed0
Au0.441
Energy-23.3
Binding len32
Me-5.839
Phylopstem1.2160041864
Phylopflank2.8844221032500004
Longest consecutive pairings7
Position of longest consecutive pairings25
Pairings in 3prime end7
PositionCDS
2D Structure