Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATTCGAAGGGAGTGCCAGA
..((((((((((((.((((...&)))))))))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175723
GeneSymbolSSX5
Binding site449,468
Score0.846
Seed1
Au0.471
Energy-18.5
Binding len19
Me-5.692
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure