Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCTGGACCCACAGACTGCGTGAGAGAAAGCAGCTGGTGG
((((((((.((((((..((((.&.)))).....)))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175729
GeneSymbolSSX4
Binding site395,436
Score0.846
Seed1
Au0.456
Energy-22.2
Binding len26
Me-5.227
Phylopstem0.2068780625
Phylopflank0.55595501
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure