Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGCTGCAGA
.....(((((((((.......&))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_175729
GeneSymbolSSX4
Binding site269,279
Score0.923
Seed0
Au0.485
Energy-17.6
Binding len10
Me-14.634
Phylopstem0.4301016666666666
Phylopflank0.6595873962499998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure