Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCGCTGGGCCAGTGTGTTTACGTGCATTGTAAGGCTGGGC
.((((((.(((((((((.....&.)))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_175732
GeneSymbolPTPMT1
Binding site388,430
Score0.923
Seed1
Au0.397
Energy-19.2
Binding len19
Me-6.107
Phylopstem-0.4558725777777778
Phylopflank-0.33195070474999994
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end3
PositionCDS
2D Structure