Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCGAGCAGCTGCGGCTCAGCAC
.(((((((((((((((..((.&))..))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175732
GeneSymbolPTPMT1
Binding site298,320
Score0.962
Seed1
Au0.412
Energy-22.8
Binding len22
Me-3.793
Phylopstem-0.11357677058823529
Phylopflank-0.4776535475
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure