Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTCACCTGAGCTGCGCTGCAT
.((((((.((((((...((((&.)))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175734
GeneSymbolSPEM2
Binding site776,801
Score0.923
Seed1
Au0.382
Energy-21.6
Binding len19
Me-7.075
Phylopstem3.0403536666666664
Phylopflank3.943424689375
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure