Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTTCCGCGGCTCCTATTCATACACGCAGG
((((((((((((..((((((.&))))))..)))))))).............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175839
GeneSymbolSMOX
Binding site1601,1635
Score0.846
Seed1
Au0.382
Energy-25.7
Binding len34
Me-6.084
Phylopstem4.314010652
Phylopflank3.74976161125
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end6
PositionCDS
2D Structure